Photorhabdus laumondii DJC

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus laumondii DJC is a Gram-negative, facultatively anaerobic bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This species is mesophilic, thriving within a temperature range that supports its growth in moderate conditions. Notably, Photorhabdus laumondii DJC possesses a single replicon, indicating a streamlined genetic structure. One of the key aspects of Photorhabdus laumondii DJC is its symbiotic relationship with specific nematodes, which enhances its ecological role. This bacterium is known to engage in mutualistic interactions, providing benefits to both itself and its nematode hosts. The bacterium aids in the nematodes' ability to infect and kill insect hosts, which in turn creates an environment rich in nutrients for Photorhabdus laumondii DJC to flourish. The accession number for this strain is CP024900.1, which can be referenced for further genetic and genomic studies. In summary, the traits of Photorhabdus laumondii DJC highlight its adaptability and ecological significance, particularly in its symbiotic interactions that influence insect populations and contribute to the dynamics of the soil ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus laumondii
StrainDJC

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus laumondii DJC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus laumondii DJC, Complete Genome

Gene Summary

Adenine Count

1584991 bp

Thymine Count

1579671 bp

Guanine Count

1171895 bp

Cytosine Count

1199982 bp

Genome Length

5536539 bp

Protein-coding Genes

4472 genes

Non-Coding Genes

481 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion protein lcrgPluDJC_18570P69957Negative4245672 - 424595010452.5
type iii secretion system regulator lcrrPluDJC_18575A1JU75Negative4245991 - 424642516835.4
escv/yscv/hrcv family type iii secretion system export apparatus proteinPluDJC_18580P0C2V3Negative4246422 - 424853977395.0
type iii secretion proteinPluDJC_18585P0C2N2Negative4248536 - 424886512176.9
yscx family type iii secretion proteinPluDJC_18590P0C2N4Negative4248868 - 424923313454.2
type iii secretion chaperone sycnPluDJC_18595P0C2V8Negative4249230 - 424960114112.3
tyea family type iii secretion system gatekeeper subunitPluDJC_18600P69967Negative4249598 - 424988510797.8
yopn family type iii secretion system gatekeeper subunitPluDJC_18605P16945Negative4249866 - 425073832105.3
hypothetical proteinPluDJC_18610Not AvailableNegative4250894 - 425116910186.6
escn/yscn/hrcn family type iii secretion system atpasePluDJC_18615P40290Positive4251168 - 425249048014.1

Displaying genes 3781 – 3790 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.