Photorhabdus laumondii DJC

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus laumondii DJC is a Gram-negative, facultatively anaerobic bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This species is mesophilic, thriving within a temperature range that supports its growth in moderate conditions. Notably, Photorhabdus laumondii DJC possesses a single replicon, indicating a streamlined genetic structure. One of the key aspects of Photorhabdus laumondii DJC is its symbiotic relationship with specific nematodes, which enhances its ecological role. This bacterium is known to engage in mutualistic interactions, providing benefits to both itself and its nematode hosts. The bacterium aids in the nematodes' ability to infect and kill insect hosts, which in turn creates an environment rich in nutrients for Photorhabdus laumondii DJC to flourish. The accession number for this strain is CP024900.1, which can be referenced for further genetic and genomic studies. In summary, the traits of Photorhabdus laumondii DJC highlight its adaptability and ecological significance, particularly in its symbiotic interactions that influence insect populations and contribute to the dynamics of the soil ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus laumondii
StrainDJC

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus laumondii DJC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus laumondii DJC, Complete Genome

Gene Summary

Adenine Count

1584991 bp

Thymine Count

1579671 bp

Guanine Count

1171895 bp

Cytosine Count

1199982 bp

Genome Length

5536539 bp

Protein-coding Genes

4472 genes

Non-Coding Genes

481 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonucleoside-diphosphate reductase subunit alphaPluDJC_15600P00452Positive3464031 - 346632286188.6
ribonucleotide-diphosphate reductase subunit betaPluDJC_15605P69925Positive3466335 - 346746543386.5
(2fe-2s)-binding proteinPluDJC_15610P0ABW4Positive3467465 - 34677319990.13
type ii toxin-antitoxin system yafo family toxinPluDJC_15615Q47157Negative3467853 - 346823314956.9
iron-sulfur cluster assembly scaffold protein sufaPluDJC_15620Not AvailableNegative3468233 - 346890424786.2
pin domain-containing proteinPluDJC_15625P55511Negative3469013 - 346943214785.9
arc family dna-binding proteinPluDJC_15630P55510Negative3469429 - 34696688776.53
gfo/idh/moca family oxidoreductasePluDJC_15635T2KNC8Positive3469998 - 347101137850.4
is1634 family transposase isplu4PluDJC_15640Not AvailableNegative3471131 - 347274760377.6
duf1436 domain-containing proteinPluDJC_15645B3BM81Negative3473027 - 347353318745.2

Displaying genes 3271 – 3280 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.