Photorhabdus laumondii DJC

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus laumondii DJC is a Gram-negative, facultatively anaerobic bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This species is mesophilic, thriving within a temperature range that supports its growth in moderate conditions. Notably, Photorhabdus laumondii DJC possesses a single replicon, indicating a streamlined genetic structure. One of the key aspects of Photorhabdus laumondii DJC is its symbiotic relationship with specific nematodes, which enhances its ecological role. This bacterium is known to engage in mutualistic interactions, providing benefits to both itself and its nematode hosts. The bacterium aids in the nematodes' ability to infect and kill insect hosts, which in turn creates an environment rich in nutrients for Photorhabdus laumondii DJC to flourish. The accession number for this strain is CP024900.1, which can be referenced for further genetic and genomic studies. In summary, the traits of Photorhabdus laumondii DJC highlight its adaptability and ecological significance, particularly in its symbiotic interactions that influence insect populations and contribute to the dynamics of the soil ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus laumondii
StrainDJC

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus laumondii DJC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus laumondii DJC, Complete Genome

Gene Summary

Adenine Count

1584991 bp

Thymine Count

1579671 bp

Guanine Count

1171895 bp

Cytosine Count

1199982 bp

Genome Length

5536539 bp

Protein-coding Genes

4472 genes

Non-Coding Genes

481 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dethiobiotin synthetase biodPluDJC_07350Q8ZGW9Positive1669688 - 167036824422.3
hypothetical proteinPluDJC_07355P54163Negative1670556 - 167144933189.2
xre family transcriptional regulatorPluDJC_07360Not AvailableNegative1671450 - 167206423359.9
hypothetical proteinPluDJC_07365Not AvailablePositive1672864 - 16730436513.22
excinuclease abc subunit bPluDJC_07370Q7N6Q1Positive1673768 - 167577776062.9
type vi secretion system tip protein vgrgPluDJC_07375E0SIS4Positive1676427 - 167854179464.2
vrr-nuc domain-containing proteinPluDJC_07380Not AvailablePositive1678544 - 167990249982.5
duf3396 domain-containing proteinPluDJC_07385Not AvailablePositive1679917 - 168106243932.0
duf3396 domain-containing proteinPluDJC_07390Not AvailablePositive1681100 - 168224543937.7
paar domain-containing proteinPluDJC_07395Not AvailablePositive1682249 - 16825219303.35

Displaying genes 1931 – 1940 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.