Photorhabdus laumondii DJC

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus laumondii DJC is a Gram-negative, facultatively anaerobic bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This species is mesophilic, thriving within a temperature range that supports its growth in moderate conditions. Notably, Photorhabdus laumondii DJC possesses a single replicon, indicating a streamlined genetic structure. One of the key aspects of Photorhabdus laumondii DJC is its symbiotic relationship with specific nematodes, which enhances its ecological role. This bacterium is known to engage in mutualistic interactions, providing benefits to both itself and its nematode hosts. The bacterium aids in the nematodes' ability to infect and kill insect hosts, which in turn creates an environment rich in nutrients for Photorhabdus laumondii DJC to flourish. The accession number for this strain is CP024900.1, which can be referenced for further genetic and genomic studies. In summary, the traits of Photorhabdus laumondii DJC highlight its adaptability and ecological significance, particularly in its symbiotic interactions that influence insect populations and contribute to the dynamics of the soil ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus laumondii
StrainDJC

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus laumondii DJC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus laumondii DJC, Complete Genome

Gene Summary

Adenine Count

1584991 bp

Thymine Count

1579671 bp

Guanine Count

1171895 bp

Cytosine Count

1199982 bp

Genome Length

5536539 bp

Protein-coding Genes

4472 genes

Non-Coding Genes

481 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-e crispr-associated protein cse1/casaPluDJC_03800Q46901Positive853105 - 85470960968.4
type i-e crispr-associated protein cse2/casbPluDJC_03805Not AvailablePositive854709 - 85529022053.8
type i-e crispr-associated protein cas7/cse4/cascPluDJC_03810Q46899Positive855311 - 85634537522.7
type i-e crispr-associated protein cas5/casdPluDJC_03815Q46898Positive856356 - 85710228040.0
type i-e crispr-associated protein cas6/cse3/casePluDJC_03820Q46897Positive857089 - 85776325782.4
pyridoxal-dependent decarboxylase, exosortase a system-associatedPluDJC_03825Q2L4H3Negative859389 - 86060344388.9
hypothetical proteinPluDJC_03830Not AvailablePositive860584 - 8607997796.8
3-oxoacyl-acp synthasePluDJC_03835A5EXD7Negative860989 - 86192434268.6
hypothetical proteinPluDJC_03840Not AvailableNegative861933 - 86284735353.0
alpha/beta hydrolasePluDJC_03845Not AvailableNegative862840 - 86377234348.6

Displaying genes 1221 – 1230 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.