Pedobacter schmidteae EG

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter schmidteae EG is a bacterial species characterized by the presence of flagella, which suggests it is motile. This motility may play a significant role in its ecological interactions, allowing it to navigate through various environments. The species is noted for having a singular replicon, indicating a simplified genomic structure compared to bacteria with multiple replicons, which can have implications for its genetic stability and replication efficiency. The accession number LS999839.1 serves as a reference for the genetic information related to Pedobacter schmidteae EG, facilitating further research and study of its characteristics. This accession provides a basis for understanding the genetic makeup and potential functional capabilities of this bacterium. In terms of ecological insights, the presence of flagella in Pedobacter schmidteae EG may enhance its ability to colonize different niches and interact with other microorganisms. This could be particularly important in environments where resource competition occurs, as motility can aid in locating nutrients or escaping unfavorable conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter schmidteae
StrainEG

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter schmidteae EG


Gene Summary

Adenine Count

1835683 bp

Thymine Count

1812662 bp

Guanine Count

1291160 bp

Cytosine Count

1259013 bp

Genome Length

6198518 bp

Protein-coding Genes

4834 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical protein-Not AvailablePositive976167 - 97719239234.3
hypothetical protein-Not AvailablePositive977221 - 97795527939.6
hypothetical protein-Not AvailablePositive978176 - 97880524160.4
hypothetical protein-Q5UQ73Negative978942 - 97968828784.2
hypothetical protein-Not AvailableNegative979715 - 98044927815.9
hypothetical protein-Not AvailableNegative980512 - 98109022255.2
hypothetical protein-Not AvailablePositive982285 - 98347844121.3
hypothetical protein-Not AvailablePositive984929 - 98590939391.3
Trna-serNot AvailableNot AvailablePositive986066 - 986139Not Available
hypothetical protein-Not AvailableNegative986611 - 98836268458.3

Displaying genes 781 – 790 of 4903 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.