Polaribacter sp. AHE53.11, AHE13PA

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. AHE53.11 and AHE13PA are Gram-negative bacteria characterized by a rod-shaped morphology. They possess a single replicon, indicating a streamlined genetic organization that is typical of many prokaryotic organisms. The genomic data for Polaribacter sp. AHE53.11 can be accessed through the accession number CP058985.1. This genus, Polaribacter, is known for its role in marine environments, where it contributes to the degradation of organic matter. Members of the Polaribacter genus are often associated with ice and cold habitats, which aligns with their ecological niche as psychrophilic microorganisms. Their ability to thrive in such extreme conditions underscores their potential importance in biogeochemical cycles, particularly in polar and subpolar regions. The traits of Polaribacter sp. AHE53.11 and AHE13PA highlight their adaptation to specific ecological roles within marine ecosystems. Their Gram-negative cell structure suggests they may possess unique protective features and metabolic capabilities that allow them to interact effectively with their environment. Understanding these traits can provide insights into their ecological functions and contributions to nutrient cycling in cold marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp.
StrainAHE53.11, AHE13PA

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. AHE53.11, AHE13PA
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; polar sea ice
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. AHE53.11, AHE13PA, Complete Genome

Gene Summary

Adenine Count

1444147 bp

Thymine Count

1435399 bp

Guanine Count

632160 bp

Cytosine Count

628003 bp

Genome Length

4139709 bp

Protein-coding Genes

3438 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeH0I28_00010A9BGL0Positive4 - 67224783.1
n-acetylmuramoyl-l-alanine amidaseH0I28_00015Not AvailablePositive687 - 134625143.5
susd/ragb family nutrient-binding outer membrane lipoproteinH0I28_00020Not AvailableNegative1431 - 294256121.3
susc/raga family tonb-linked outer membrane proteinH0I28_00025T2KM18Negative2953 - 5988109760.0
osmc family proteinH0I28_00030P0ADX3Positive6301 - 673216136.3
single-stranded-dna-specific exonuclease recjH0I28_00035O32044Positive6747 - 843263106.4
helix-turn-helix domain-containing proteinH0I28_00040Q0P9V4Negative8639 - 1104191227.5
aldehyde dehydrogenaseH0I28_00045P39616Negative11142 - 1251851180.3
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseH0I28_00050P0AFG7Negative12947 - 1415843167.1
2-oxoglutarate dehydrogenase e1 componentH0I28_00055P20707Negative14355 - 17087104548.0

Displaying genes 1 – 10 of 3508 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.