Vibrio spartinae SMJ21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio spartinae SMJ21 is a bacterium characterized by its presence in PBS films, indicating a specific habitat that may influence its ecological interactions and adaptations. This organism contains two replicons, which suggests a complex genetic structure that may contribute to its metabolic versatility and resilience in its environment. The genetic information of V. spartinae SMJ21 is cataloged under two accession numbers: AP024907.1 and AP024908.1. These accessions provide a basis for further genomic studies and a better understanding of its phylogenetic relationships within the Vibrio genus. The presence of V. spartinae SMJ21 in PBS films may indicate its role in biofilm formation, which is crucial in various ecological contexts, including nutrient cycling and interactions with other microbial communities. Biofilms often serve as a protective environment for microorganisms, enabling them to thrive in potentially harsh conditions. Understanding the ecological role of V. spartinae SMJ21 in PBS films can shed light on its contributions to microbial diversity and ecosystem functioning in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio spartinae
StrainSMJ21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio spartinae SMJ21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatPBS films
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio spartinae SMJ21, Complete Genome

Gene Summary

Adenine Count

1084786 bp

Thymine Count

1091931 bp

Guanine Count

910684 bp

Cytosine Count

916226 bp

Genome Length

4003627 bp

Protein-coding Genes

3309 genes

Non-Coding Genes

219 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical protein-Not AvailableNegative2343801 - 234448725734.5
Putative tail protein-Not AvailableNegative2344508 - 234504719981.8
Gp21 protein-Not AvailableNegative2345270 - 234554510829.5
Orf35-Not AvailableNegative2345559 - 234678843771.8
Putative tail protein-Not AvailableNegative2346788 - 234733920499.7
Gp21 protein-Not AvailableNegative2347561 - 234783610780.5
Orf35-Not AvailableNegative2347850 - 234908244108.0
Putative tail protein-Not AvailableNegative2349082 - 234963320469.7
Phage tail protein i-Not AvailableNegative2349630 - 235039427906.2
Baseplate assembly protein-P51767Negative2350354 - 235135536782.8

Displaying genes 41 – 50 of 4533 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.