Vibrio spartinae SMJ21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio spartinae SMJ21 is a bacterium characterized by its presence in PBS films, indicating a specific habitat that may influence its ecological interactions and adaptations. This organism contains two replicons, which suggests a complex genetic structure that may contribute to its metabolic versatility and resilience in its environment. The genetic information of V. spartinae SMJ21 is cataloged under two accession numbers: AP024907.1 and AP024908.1. These accessions provide a basis for further genomic studies and a better understanding of its phylogenetic relationships within the Vibrio genus. The presence of V. spartinae SMJ21 in PBS films may indicate its role in biofilm formation, which is crucial in various ecological contexts, including nutrient cycling and interactions with other microbial communities. Biofilms often serve as a protective environment for microorganisms, enabling them to thrive in potentially harsh conditions. Understanding the ecological role of V. spartinae SMJ21 in PBS films can shed light on its contributions to microbial diversity and ecosystem functioning in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio spartinae
StrainSMJ21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio spartinae SMJ21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatPBS films
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio spartinae SMJ21, Complete Genome

Gene Summary

Adenine Count

328078 bp

Thymine Count

326803 bp

Guanine Count

265836 bp

Cytosine Count

268050 bp

Genome Length

1188767 bp

Protein-coding Genes

976 genes

Non-Coding Genes

29 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive2227124 - 2227136Not Available
Hypothetical protein-Not AvailableNegative2240510 - 224190751474.2
Hypothetical protein-Not AvailableNegative2241920 - 22421598019.62
Hypothetical protein-Not AvailableNegative2242170 - 224253813384.4
Hypothetical protein-Not AvailableNegative2242551 - 224321023594.6
Hypothetical protein-Not AvailableNegative2243214 - 224361215255.5
hypothetical protein-Not AvailableNegative2243609 - 224396514377.7
Tail fiber protein-Not AvailableNegative2243962 - 224567760607.2
Hypothetical protein-Not AvailableNegative2245674 - 224727858504.2
Hypothetical protein-Not AvailableNegative2247295 - 224788222461.4

Displaying genes 1 – 10 of 4533 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.