Vibrio aphrogenes CA-1004

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio aphrogenes CA-1004 is characterized by having two distinct replicons, which are crucial for its genetic stability and adaptability. The organism is cataloged in the National Center for Biotechnology Information (NCBI) with the accession numbers AP018689.1 and AP018690.1, providing a reference for its genomic data. Vibrio species, including Vibrio aphrogenes, are known for their ecological roles, particularly in marine environments. They are often associated with aquatic habitats and can play significant roles in nutrient cycling and the decomposition of organic matter. The presence of multiple replicons in Vibrio aphrogenes could suggest a potential for increased genetic diversity, which may enhance its adaptability to various environmental conditions. Understanding the genomic structure and characteristics of Vibrio aphrogenes CA-1004 can provide insights into its ecological interactions and its potential applications in biotechnology or environmental management. Further research into its specific roles in marine ecosystems could elucidate its contributions to ecological balance and health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio aphrogenes
StrainCA-1004

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio aphrogenes CA-1004
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio aphrogenes CA-1004, Complete Genome

Gene Summary

Adenine Count

255622 bp

Thymine Count

257291 bp

Guanine Count

184363 bp

Cytosine Count

183228 bp

Genome Length

880504 bp

Protein-coding Genes

766 genes

Non-Coding Genes

3 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical protein-Q9KVY6Negative518 - 95815737.5
hypothetical protein-A7N0X8Negative988 - 234949695.2
hypothetical protein-B7VGH7Negative2475 - 412461714.9
hypothetical protein-Q9KVY3Negative4127 - 43849553.88
hypothetical protein-Q87TR4Negative4351 - 467412530.2
hypothetical protein-A7N1E5Negative4720 - 48545237.67
hypothetical protein-P45022Negative5076 - 581327074.8
hypothetical protein-P52625Negative5810 - 648125204.7
hypothetical protein-Q57335Negative6478 - 822966939.1
hypothetical protein-P52626Negative8516 - 927728137.6

Displaying genes 1 – 10 of 3017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.