Vibrio japonicus

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio japonicus is a bacterium characterized by the presence of three replicons. The specific genetic material of this organism can be referenced in several accession numbers: CP102096.1, CP102097.1, and CP102098.1. These replicons may correspond to different components of its genome, potentially including a chromosome and one or more plasmids, which can play crucial roles in its adaptability and survival. As a member of the Vibrio genus, V. japonicus is likely to inhabit marine environments, where it can be involved in various ecological interactions. Its genetic structure, indicated by the multiple replicons, suggests an evolutionary advantage that may facilitate the acquisition of genes related to environmental adaptation, pathogenicity, or resistance to antimicrobial agents. This genetic versatility could be significant for its survival in fluctuating marine ecosystems. In summary, the tripartite replicon structure of Vibrio japonicus, as demonstrated by its genomic accessions, may contribute to its ecological dynamics and interactions within marine habitats. Understanding these traits is essential for insights into the bacterium's role in microbial communities and its potential impacts on marine health and safety.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio japonicus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio japonicus
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio japonicus , Complete Genome

Gene Summary

Adenine Count

761783 bp

Thymine Count

763209 bp

Guanine Count

628377 bp

Cytosine Count

630183 bp

Genome Length

2783552 bp

Protein-coding Genes

2501 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphohistidine phosphatase sixaNP165_08755P76502Negative1849573 - 185003717116.3
insulinase family proteinNP165_08760P22817Positive1850324 - 1853098106185.0
voc family proteinNP165_08765P52007Negative1853137 - 185373322411.0
arginine--trna ligaseNP165_08770Q87RD6Positive1853980 - 185571364072.4
hit domain-containing proteinNP165_08775Not AvailablePositive1855815 - 185624316191.6
feoc-like transcriptional regulatorNP165_08780Not AvailableNegative1856369 - 18565998553.47
fe(2+) transporter permease subunit feobNP165_08785Q5WTE1Negative1856596 - 185886982904.5
ferrous iron transport protein aNP165_08790P0AEL5Negative1858866 - 18590968318.46
helix-turn-helix domain-containing proteinNP165_08795P32677Negative1859863 - 1863189125959.0
zinc abc transporter substrate-binding protein znuaNP165_08800P39172Negative1863469 - 186435032938.0

Displaying genes 1751 – 1760 of 3997 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.