Rhizobium indigoferae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium indigoferae is a rod-shaped bacterium that possesses flagella, enabling motility. This species is characterized by having five distinct replicons, which are essential for its genetic organization and replication processes. The presence of multiple replicons may contribute to its adaptability and survival in various environmental conditions. The organism is documented in several genetic accessions, including CP140635.1, CP140639.1, CP140636.1, CP140638.1, and CP140637.1, highlighting its genetic diversity and potential for further study. These accessions provide a valuable resource for researchers interested in the genomic features and evolutionary relationships of R. indigoferae. In terms of ecological significance, Rhizobium indigoferae is known to form symbiotic relationships with leguminous plants, a critical interaction that enhances nitrogen fixation in soil. This function is vital for maintaining soil fertility and promoting plant growth, which is particularly important in agricultural systems. Thus, R. indigoferae contributes not only to its own ecosystem but also plays a significant role in supporting sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium indigoferae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium indigoferae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium indigoferae , Complete Genome

Gene Summary

Adenine Count

954016 bp

Thymine Count

946764 bp

Guanine Count

1461616 bp

Cytosine Count

1501114 bp

Genome Length

4863510 bp

Protein-coding Genes

4703 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent succinate-semialdehyde dehydrogenaseU5G49_005678P25526Positive397504 - 39900053024.8
aspartate aminotransferase family proteinU5G49_005679E1V7V7Positive399031 - 40041049932.8
alcohol dehydrogenase family proteinU5G49_005680Q6AYT0Positive400425 - 40149838184.9
duf4112 domain-containing proteinU5G49_005681Not AvailablePositive401669 - 40206414002.4
rok family proteinU5G49_005682Q9X1I0Negative402092 - 40304832778.4
ribulose-phosphate 3-epimeraseU5G49_005683O34557Negative403063 - 40376425197.6
alpha/beta hydrolaseU5G49_005684P9WNH0Negative403769 - 40457828717.6
sugar phosphate isomerase/epimeraseU5G49_005685Not AvailableNegative404575 - 40542029661.3
gfo/idh/moca family oxidoreductaseU5G49_005686O05389Negative405420 - 40649639264.9
sn-glycerol-3-phosphate abc transporter atp-binding protein ugpcU5G49_005687P9WQI2Negative406623 - 40776841045.8

Displaying genes 5121 – 5130 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.