Rhizobium indigoferae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium indigoferae is a rod-shaped bacterium that possesses flagella, enabling motility. This species is characterized by having five distinct replicons, which are essential for its genetic organization and replication processes. The presence of multiple replicons may contribute to its adaptability and survival in various environmental conditions. The organism is documented in several genetic accessions, including CP140635.1, CP140639.1, CP140636.1, CP140638.1, and CP140637.1, highlighting its genetic diversity and potential for further study. These accessions provide a valuable resource for researchers interested in the genomic features and evolutionary relationships of R. indigoferae. In terms of ecological significance, Rhizobium indigoferae is known to form symbiotic relationships with leguminous plants, a critical interaction that enhances nitrogen fixation in soil. This function is vital for maintaining soil fertility and promoting plant growth, which is particularly important in agricultural systems. Thus, R. indigoferae contributes not only to its own ecosystem but also plays a significant role in supporting sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium indigoferae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium indigoferae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium indigoferae , Complete Genome

Gene Summary

Adenine Count

116795 bp

Thymine Count

115280 bp

Guanine Count

179885 bp

Cytosine Count

179617 bp

Genome Length

591577 bp

Protein-coding Genes

545 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
saccharopine dehydrogenase c-terminal domain-containing proteinU5G49_000002Q9AJC6Positive1587 - 266939278.7
radical sam family heme chaperone hemwU5G49_000003Q5SUV1Negative2737 - 393944662.1
rdgb/ham1 family non-canonical purine ntp pyrophosphataseU5G49_000004Q92SK4Negative3949 - 459322964.0
voc family proteinU5G49_000005Q56415Negative4594 - 501915399.3
ribonuclease phU5G49_000006Q1MMD1Negative5016 - 573526100.3
heat-inducible transcriptional repressor hrcaU5G49_000007Q1MMD0Positive5864 - 695239567.5
nucleotide exchange factor grpeU5G49_000008Q1MMC9Positive7064 - 769622736.6
nucleoside hydrolaseU5G49_000009Q9P6J4Negative7737 - 868134479.8
hsp20 family proteinU5G49_000010O86110Positive8960 - 938515652.9
duf1150 family proteinU5G49_000011Not AvailablePositive9433 - 96909408.2

Displaying genes 1 – 10 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.