Rhizobium indigoferae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium indigoferae is a rod-shaped bacterium that possesses flagella, enabling motility. This species is characterized by having five distinct replicons, which are essential for its genetic organization and replication processes. The presence of multiple replicons may contribute to its adaptability and survival in various environmental conditions. The organism is documented in several genetic accessions, including CP140635.1, CP140639.1, CP140636.1, CP140638.1, and CP140637.1, highlighting its genetic diversity and potential for further study. These accessions provide a valuable resource for researchers interested in the genomic features and evolutionary relationships of R. indigoferae. In terms of ecological significance, Rhizobium indigoferae is known to form symbiotic relationships with leguminous plants, a critical interaction that enhances nitrogen fixation in soil. This function is vital for maintaining soil fertility and promoting plant growth, which is particularly important in agricultural systems. Thus, R. indigoferae contributes not only to its own ecosystem but also plays a significant role in supporting sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium indigoferae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium indigoferae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium indigoferae , Complete Genome

Gene Summary

Adenine Count

954016 bp

Thymine Count

946764 bp

Guanine Count

1461616 bp

Cytosine Count

1501114 bp

Genome Length

4863510 bp

Protein-coding Genes

4703 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogen regulation protein nr(i)U5G49_001831P10577Positive1777639 - 177909053762.0
trar/dksa c4-type zinc finger proteinU5G49_001832O66611Negative1779239 - 177959513434.6
universal stress proteinU5G49_001833Not AvailableNegative1779806 - 178065129753.8
ef-hand domain-containing proteinU5G49_001834Not AvailableNegative1780841 - 178122413624.7
atp-binding proteinU5G49_001835P10577Positive1781330 - 17815086356.66
aldo/keto reductaseU5G49_001836O23016Positive1782116 - 178310536698.6
pas domain-containing sensor histidine kinaseU5G49_001837Q04850Positive1783437 - 178570782806.4
sigma-54 dependent transcriptional regulatorU5G49_001838Q04849Positive1785697 - 178706150675.4
d-amino-acid transaminaseU5G49_001839O07597Positive1787128 - 178799131561.0
rna chaperone hfqU5G49_001840B3PYU7Positive1788104 - 17883469045.05

Displaying genes 1831 – 1840 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.