Amycolatopsis rhabdoformis SB026

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis rhabdoformis SB026 is a species characterized by the presence of flagella, which are crucial for motility and may influence its ecological interactions. The organism possesses a single replicon, indicating a streamlined genetic structure that can affect its replication and adaptability. The genomic data for Amycolatopsis rhabdoformis SB026 is cataloged under the accession CP142149.1, which facilitates research and reference within microbial genomics. This accession provides a source for studying the genetic makeup and potential functions of this species. The presence of flagella suggests that Amycolatopsis rhabdoformis SB026 may have enhanced mobility in its environment, allowing it to navigate towards nutrients or away from unfavorable conditions. This motility can play a significant role in its ecological niche, possibly influencing its interactions with other microorganisms and its role in biogeochemical cycles. Overall, the traits of Amycolatopsis rhabdoformis SB026 highlight its potential adaptability and ecological significance, particularly in environments where motility may confer competitive advantages. The understanding of its genomic features and motility mechanisms can provide insights into the ecological roles of actinobacteria in various habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis rhabdoformis
StrainSB026

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis rhabdoformis SB026, Complete Genome

Gene Summary

Adenine Count

1510451 bp

Thymine Count

1510449 bp

Guanine Count

3682881 bp

Cytosine Count

3702200 bp

Genome Length

10405981 bp

Protein-coding Genes

9589 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive5424802 - 5424828Not Available
IntegraseVSH64_24750P96629Positive5424925 - 542608543313.6
Putative regulator, gntr familyVSH64_24755Q04296Negative5426146 - 542690727567.8
hypothetical proteinVSH64_24760Not AvailablePositive5427058 - 54272768658.17
hypothetical proteinVSH64_24765Not AvailablePositive5427312 - 54274856148.33
hypothetical proteinVSH64_24770Not AvailablePositive5427482 - 54276646975.16
hypothetical proteinVSH64_24775Not AvailablePositive5427852 - 542822912786.5
hypothetical proteinVSH64_24780Not AvailableNegative5428299 - 542863411903.2
Structural proteinVSH64_24785Not AvailableNegative5428631 - 542994141778.1
Minor tail proteinVSH64_24790Not AvailableNegative5429958 - 543032311819.5

Displaying genes 1 – 10 of 9690 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.