Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia litorea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1116779 bp
Thymine Count
1113420 bp
Guanine Count
1099759 bp
Cytosine Count
1099259 bp
Genome Length
4429217 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gspe family t2ss atpase variant xcpr | R50072_00510 | Q00512 | Positive | 56009 - 57442 | 51992.9 |
| gspf family t2ss innner membrane protein variant xcps | R50072_00520 | Q00513 | Positive | 57447 - 58679 | 45207.9 |
| type ii secretion system major pseudopilin gspg | R50072_00530 | P45773 | Positive | 58702 - 59157 | 16463.7 |
| hypothetical protein | R50072_00540 | Not Available | Positive | 59232 - 59684 | 16893.7 |
| type ii secretion system minor pseudopilin gspi | R50072_00550 | Q8VPC3 | Positive | 59674 - 60069 | 14476.5 |
| type ii secretion system minor pseudopilin gspj | R50072_00560 | P31589 | Positive | 60062 - 60859 | 29765.0 |
| hypothetical protein | R50072_00570 | P31706 | Positive | 60859 - 62031 | 42503.1 |
| hypothetical protein | R50072_00580 | P31708 | Positive | 62047 - 63333 | 47090.5 |
| hypothetical protein | R50072_00590 | P31709 | Positive | 63330 - 63827 | 18322.2 |
| hypothetical protein | R50072_00600 | Not Available | Positive | 63857 - 64636 | 27957.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
