Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | M5M_RS20550 | Not Available | + | 464 - 5356 | 165990.0 |
| m23 family metallopeptidase | M5M_RS00010 | Not Available | + | 5448 - 6269 | 29759.6 |
| trm112 family protein | M5M_RS00015 | C5BMQ2 | + | 6375 - 6575 | 7371.92 |
| histidine triad nucleotide-binding protein | M5M_RS00020 | P73481 | + | 6576 - 6926 | 12603.4 |
| alanine--trna ligase | M5M_RS00025 | Q21L68 | + | 6966 - 9593 | 94308.8 |
| aspartate kinase | M5M_RS00030 | Q88EI9 | + | 9744 - 10982 | 44356.2 |
| carbon storage regulator csra | M5M_RS00035 | Q21L66 | + | 11212 - 11394 | 6818.3 |
| dicarboxylate/amino acid:cation symporter | M5M_RS00040 | P21345 | + | 11897 - 13120 | 42396.2 |
| 6-carboxytetrahydropterin synthase | M5M_RS00045 | Not Available | - | 13155 - 14000 | 31837.5 |
| hamp domain-containing sensor histidine kinase | M5M_RS19210 | Q9KLK7 | + | 14219 - 15538 | 47434.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.