Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia litorea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1116779 bp
Thymine Count
1113420 bp
Guanine Count
1099759 bp
Cytosine Count
1099259 bp
Genome Length
4429217 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | R50072_05670 | C5BQX2 | Positive | 644437 - 647241 | 104484.0 |
| signal peptidase ii | R50072_05680 | C5BQX3 | Positive | 647261 - 647737 | 17504.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | R50072_05690 | P21863 | Positive | 647744 - 648187 | 15754.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | R50072_05700 | Q21HK6 | Positive | 648187 - 649155 | 35177.0 |
| hypothetical protein | R50072_05710 | Not Available | Positive | 649812 - 650306 | 17392.8 |
| hypothetical protein | R50072_05720 | Not Available | Positive | 650303 - 651331 | 36436.3 |
| hypothetical protein | R50072_05730 | Not Available | Positive | 651331 - 651945 | 22027.5 |
| type 4a pilus biogenesis protein pily1 | R50072_05740 | Q9HVM8 | Positive | 651935 - 655417 | 125293.0 |
| hypothetical protein | R50072_05750 | Not Available | Positive | 655428 - 655724 | 11245.5 |
| type 4a pilus minor pilin pile | R50072_05760 | G3XD43 | Positive | 655748 - 656200 | 15547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
