Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia litorea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1116779 bp
Thymine Count
1113420 bp
Guanine Count
1099759 bp
Cytosine Count
1099259 bp
Genome Length
4429217 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trka | R50072_00110 | E1V6C6 | Negative | 13167 - 14552 | 50303.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | R50072_00120 | Q9I7A9 | Negative | 14568 - 15839 | 46879.8 |
| methionyl-trna formyltransferase | R50072_00130 | A3QJF5 | Negative | 15832 - 16809 | 34931.2 |
| peptide deformylase | R50072_00140 | B3PGY7 | Negative | 16839 - 17345 | 19178.0 |
| lysm peptidoglycan-binding domain-containing protein | R50072_00150 | P45932 | Positive | 17621 - 18664 | 37851.7 |
| dna-processing protein dpra | R50072_00160 | P43862 | Positive | 18769 - 19881 | 39695.4 |
| sua5/ycio/yrdc/ywlc family protein | R50072_00170 | Q02V59 | Positive | 19964 - 20536 | 20078.1 |
| oxygen-dependent coproporphyrinogen oxidase | R50072_00180 | Q21PU0 | Positive | 20564 - 21481 | 34760.6 |
| shikimate dehydrogenase | R50072_00190 | Q21PT9 | Positive | 21469 - 22314 | 29909.1 |
| gamma carbonic anhydrase family protein | R50072_00200 | P0A9W9 | Negative | 22336 - 22878 | 19406.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
