Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia litorea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1116779 bp
Thymine Count
1113420 bp
Guanine Count
1099759 bp
Cytosine Count
1099259 bp
Genome Length
4429217 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | R50072_01400 | Q0VM16 | Negative | 132750 - 133736 | 37015.0 |
| duf484 family protein | R50072_01410 | Q83IW8 | Negative | 133736 - 134407 | 25186.4 |
| diaminopimelate epimerase | R50072_01420 | B3PEI8 | Negative | 134426 - 135256 | 29597.6 |
| diaminopimelate decarboxylase | R50072_01430 | P19572 | Negative | 135292 - 136536 | 44539.5 |
| class i adenylate cyclase | R50072_01440 | P59739 | Negative | 136767 - 139574 | 106709.0 |
| hypothetical protein | R50072_01450 | Q54YZ9 | Negative | 139593 - 142250 | 98799.6 |
| hypothetical protein | R50072_01460 | Q54YZ9 | Negative | 142376 - 145828 | 129540.0 |
| argininosuccinate lyase | R50072_01470 | Q21EF4 | Negative | 145900 - 147294 | 51329.0 |
| alginate biosynthesis two-component system sensor histidine kinase algz | R50072_01480 | Q4L8V3 | Positive | 147569 - 148597 | 38082.7 |
| lyttr family dna-binding domain-containing protein | R50072_01490 | P26275 | Positive | 148597 - 149331 | 27194.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
