Rhodococcus qingshengii djl-6

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus qingshengii djl-6 is a notable bacterium characterized by the presence of flagella, which suggests that it is motile. This motility could play a significant role in its ecological interactions and ability to colonize various environments. The genome of R. qingshengii djl-6 consists of six replicons, indicating a complex genetic architecture that may contribute to its adaptability and metabolic versatility. The genomic data for R. qingshengii djl-6 are recorded under several accessions: CP096563.1, CP096564.1, CP096565.1, CP096566.1, CP096567.1, and CP096568.1. These accessions provide a foundation for further genetic and functional analysis of this species. Given its motility and genomic complexity, R. qingshengii djl-6 may be well-suited for diverse ecological niches, potentially allowing it to engage in various biogeochemical processes. The presence of multiple replicons is often associated with the ability to metabolize a wide range of substrates, which could enhance its survival and ecological role in environments where it is found. Understanding these traits can provide insights into the ecological dynamics of Rhodococcus species and their potential applications in bioremediation or other biotechnological fields.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus qingshengii
Straindjl-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus qingshengii djl-6, Complete Genome

Gene Summary

Adenine Count

1203420 bp

Thymine Count

1200213 bp

Guanine Count

1997177 bp

Cytosine Count

2004292 bp

Genome Length

6405102 bp

Protein-coding Genes

5831 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal-sensitive transcriptional regulatorM0639_33245O07434Positive450000 - 4502699558.65
mbl fold metallo-hydrolaseM0639_33250Q9C8L4Positive450323 - 45169049140.1
cadmium resistance transporterM0639_33255Not AvailableNegative452053 - 45265520627.9
signal peptidase iiM0639_33260C3MEK8Negative452705 - 45322918276.2
cadmium-translocating p-type atpaseM0639_33265P63690Negative453226 - 45517866275.6
metalloregulator arsr/smtb family transcription factorM0639_33270P30346Negative455171 - 45555112992.5
heavy metal-responsive transcriptional regulatorM0639_33275P22853Positive455857 - 45631516822.1
alkylmercury lyaseM0639_33280Not AvailableNegative456418 - 45675612033.3
merr family transcriptional regulatorM0639_33285P0A183Negative456753 - 45715715271.1
metalloregulator arsr/smtb family transcription factorM0639_33290Q58721Positive457267 - 45765313730.4

Displaying genes 6651 – 6660 of 6983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.