Rhodococcus qingshengii djl-6

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus qingshengii djl-6 is a notable bacterium characterized by the presence of flagella, which suggests that it is motile. This motility could play a significant role in its ecological interactions and ability to colonize various environments. The genome of R. qingshengii djl-6 consists of six replicons, indicating a complex genetic architecture that may contribute to its adaptability and metabolic versatility. The genomic data for R. qingshengii djl-6 are recorded under several accessions: CP096563.1, CP096564.1, CP096565.1, CP096566.1, CP096567.1, and CP096568.1. These accessions provide a foundation for further genetic and functional analysis of this species. Given its motility and genomic complexity, R. qingshengii djl-6 may be well-suited for diverse ecological niches, potentially allowing it to engage in various biogeochemical processes. The presence of multiple replicons is often associated with the ability to metabolize a wide range of substrates, which could enhance its survival and ecological role in environments where it is found. Understanding these traits can provide insights into the ecological dynamics of Rhodococcus species and their potential applications in bioremediation or other biotechnological fields.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus qingshengii
Straindjl-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus qingshengii djl-6, Complete Genome

Gene Summary

Adenine Count

1203420 bp

Thymine Count

1200213 bp

Guanine Count

1997177 bp

Cytosine Count

2004292 bp

Genome Length

6405102 bp

Protein-coding Genes

5831 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinM0639_28345Not AvailablePositive6130722 - 613181941085.0
coa transferaseM0639_28350P96877Positive6131816 - 613295240639.3
nitronate monooxygenaseM0639_28355Q9I4V0Positive6133093 - 613401632198.6
hypothetical proteinM0639_28360Not AvailableNegative6134017 - 613431611147.1
type 1 glutamine amidotransferase domain-containing proteinM0639_28365Q04432Negative6135020 - 613571225242.8
tetr/acrr family transcriptional regulatorM0639_28370A8AKV8Negative6135748 - 613632320227.2
nadh:flavin oxidoreductase/nadh oxidase family proteinM0639_28375A0A482NAR8Positive6136385 - 613767746314.7
acetoacetate decarboxylase family proteinM0639_28380Not AvailablePositive6137803 - 613871432875.0
succinic semialdehyde dehydrogenaseM0639_28385A0PST9Positive6138753 - 614034556455.9
nad(p)h-quinone oxidoreductaseM0639_28390Q53FA7Positive6140416 - 614138732925.0

Displaying genes 5671 – 5680 of 6983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.