Mucilaginibacter jinjuensis YC7004

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter jinjuensis YC7004 is a Gram-negative, rod-shaped bacterium characterized by its unique ecological niche. This species is distinguished by having a single replicon, which is a significant trait for its genetic stability and replication processes. The genome of Mucilaginibacter jinjuensis is available under the accession number CP117167.1, providing a resource for further genomic studies. The classification of Mucilaginibacter jinjuensis within the broader context of microbial diversity suggests its potential role in various ecological interactions. As a member of the Mucilaginibacter genus, it may be involved in the breakdown of organic materials, contributing to nutrient cycling in its environment. The Gram-negative nature of this bacterium indicates that it possesses a thin peptidoglycan layer and an outer membrane, traits that can influence its interactions with other microorganisms and its resilience in different habitats. Understanding the characteristics and ecological roles of Mucilaginibacter jinjuensis YC7004 can provide insights into its potential applications in bioremediation or agricultural biotechnology. Its ability to thrive in specific environments may also inform studies on microbial community dynamics and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter jinjuensis
StrainYC7004

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter jinjuensis YC7004, Complete Genome

Gene Summary

Adenine Count

1783185 bp

Thymine Count

1779259 bp

Guanine Count

1302540 bp

Cytosine Count

1292409 bp

Genome Length

6157393 bp

Protein-coding Genes

5273 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma factor-like helix-turn-helix dna-binding proteinPQO05_24265Not AvailablePositive5606895 - 560736217823.5
hypothetical proteinPQO05_24270Not AvailablePositive5607359 - 560786219962.1
rhomboid family intramembrane serine proteasePQO05_24275Q8VZ48Negative5608028 - 560950655070.9
spfh domain-containing proteinPQO05_24280Not AvailableNegative5609791 - 561167168411.1
nipsnap family proteinPQO05_24285Not AvailableNegative5611945 - 561268828054.6
duf6377 domain-containing proteinPQO05_24290Not AvailablePositive5612864 - 561446561679.8
susc/raga family tonb-linked outer membrane proteinPQO05_24295T2KM18Positive5614883 - 5618035113063.0
ragb/susd family nutrient uptake outer membrane proteinPQO05_24300T2KNB8Positive5618047 - 561985566338.1
endo-1,3-alpha-glucanase family glycosylhydrolasePQO05_24305Not AvailablePositive5619940 - 562156261838.6
glycoside hydrolase family 97 proteinPQO05_24310G8JZS4Positive5621610 - 562372179229.6

Displaying genes 4851 – 4860 of 5337 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.