Mucilaginibacter jinjuensis YC7004

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter jinjuensis YC7004 is a Gram-negative, rod-shaped bacterium characterized by its unique ecological niche. This species is distinguished by having a single replicon, which is a significant trait for its genetic stability and replication processes. The genome of Mucilaginibacter jinjuensis is available under the accession number CP117167.1, providing a resource for further genomic studies. The classification of Mucilaginibacter jinjuensis within the broader context of microbial diversity suggests its potential role in various ecological interactions. As a member of the Mucilaginibacter genus, it may be involved in the breakdown of organic materials, contributing to nutrient cycling in its environment. The Gram-negative nature of this bacterium indicates that it possesses a thin peptidoglycan layer and an outer membrane, traits that can influence its interactions with other microorganisms and its resilience in different habitats. Understanding the characteristics and ecological roles of Mucilaginibacter jinjuensis YC7004 can provide insights into its potential applications in bioremediation or agricultural biotechnology. Its ability to thrive in specific environments may also inform studies on microbial community dynamics and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter jinjuensis
StrainYC7004

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter jinjuensis YC7004, Complete Genome

Gene Summary

Adenine Count

1783185 bp

Thymine Count

1779259 bp

Guanine Count

1302540 bp

Cytosine Count

1292409 bp

Genome Length

6157393 bp

Protein-coding Genes

5273 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system contractile sheath small subunitPQO05_17160Not AvailableNegative3902570 - 390301016805.0
atp-dependent clp protease atp-binding subunitPQO05_17165Q9A9T4Negative3903110 - 390558792000.5
type vi secretion system protein tssrPQO05_17170Not AvailableNegative3905598 - 390797388255.4
pkd domain-containing proteinPQO05_17175Q58863Negative3907993 - 390895235727.2
type vi secretion system tssoPQO05_17180Not AvailableNegative3908995 - 390948619113.8
type vi secretion system tssoPQO05_17185Not AvailableNegative3909492 - 391001019967.1
gpw/gp25 family proteinPQO05_17190Not AvailablePositive3910225 - 391065917011.5
hypothetical proteinPQO05_17195Not AvailablePositive3910664 - 391250870209.6
type vi secretion system baseplate subunit tssgPQO05_17200Not AvailableNegative3912505 - 391344335277.8
tssn family type vi secretion system proteinPQO05_17205Not AvailablePositive3913559 - 391445234862.2

Displaying genes 3431 – 3440 of 5337 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.