Mucilaginibacter jinjuensis YC7004

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter jinjuensis YC7004 is a Gram-negative, rod-shaped bacterium characterized by its unique ecological niche. This species is distinguished by having a single replicon, which is a significant trait for its genetic stability and replication processes. The genome of Mucilaginibacter jinjuensis is available under the accession number CP117167.1, providing a resource for further genomic studies. The classification of Mucilaginibacter jinjuensis within the broader context of microbial diversity suggests its potential role in various ecological interactions. As a member of the Mucilaginibacter genus, it may be involved in the breakdown of organic materials, contributing to nutrient cycling in its environment. The Gram-negative nature of this bacterium indicates that it possesses a thin peptidoglycan layer and an outer membrane, traits that can influence its interactions with other microorganisms and its resilience in different habitats. Understanding the characteristics and ecological roles of Mucilaginibacter jinjuensis YC7004 can provide insights into its potential applications in bioremediation or agricultural biotechnology. Its ability to thrive in specific environments may also inform studies on microbial community dynamics and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter jinjuensis
StrainYC7004

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter jinjuensis YC7004, Complete Genome

Gene Summary

Adenine Count

1783185 bp

Thymine Count

1779259 bp

Guanine Count

1302540 bp

Cytosine Count

1292409 bp

Genome Length

6157393 bp

Protein-coding Genes

5273 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fecr domain-containing proteinPQO05_05560Not AvailableNegative1196244 - 119724238363.9
sigma-70 family rna polymerase sigma factorPQO05_05565O07627Negative1197315 - 119789322528.1
sdr family nad(p)-dependent oxidoreductasePQO05_05570P39577Negative1198767 - 119954328547.4
helix-turn-helix domain-containing proteinPQO05_05575Q65Q31Negative1199606 - 120056237291.2
glycoside hydrolase family 30 beta sandwich domain-containing proteinPQO05_05580O16581Positive1200895 - 120231354466.5
rna polymerase sigma-70 factorPQO05_05585Q45585Positive1202657 - 120322922611.5
duf4974 domain-containing proteinPQO05_05590Not AvailablePositive1203293 - 120440840494.6
susc/raga family tonb-linked outer membrane proteinPQO05_05595T2KPJ3Positive1204525 - 1208172133622.0
ragb/susd family nutrient uptake outer membrane proteinPQO05_05600T2KN63Positive1208184 - 120964453212.0
carboxy terminal-processing peptidasePQO05_05605P45306Positive1209800 - 121188176557.5

Displaying genes 1111 – 1120 of 5337 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.