Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydei/ompd-associated family protein | SWIT_RS00200 | Not Available | Positive | 41887 - 42510 | 23171.6 |
| ribonuclease d | SWIT_RS00205 | Not Available | Negative | 42513 - 43688 | 43276.3 |
| aspartate--trna ligase | SWIT_RS00210 | Not Available | Positive | 43788 - 45566 | 65845.5 |
| polyphosphate kinase 2 family protein | SWIT_RS00215 | Not Available | Positive | 45783 - 46568 | 30628.3 |
| hu family dna-binding protein | SWIT_RS00220 | Not Available | Positive | 46707 - 46979 | 9586.52 |
| Trna-val | Not Available | Not Available | Positive | 47180 - 47254 | Not Available |
| type ii toxin-antitoxin system hicb family antitoxin | SWIT_RS00230 | Not Available | Negative | 47310 - 47702 | 14141.6 |
| type ii toxin-antitoxin system hica family toxin | SWIT_RS00235 | Not Available | Negative | 47725 - 47907 | 6916.39 |
| phosphotransferase family protein | SWIT_RS00240 | Not Available | Negative | 47976 - 48782 | 29472.6 |
| hypothetical protein | SWIT_RS00245 | Not Available | Positive | 48911 - 49090 | 6353.36 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
