Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1 plasmid pSWIT02, complete sequence.
Gene Summary
Adenine Count
43401 bp
Thymine Count
42984 bp
Guanine Count
67570 bp
Cytosine Count
68802 bp
Genome Length
222757 bp
Protein-coding Genes
223 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | SWIT_RS00005 | Not Available | Positive | 245 - 1678 | 52706.6 |
| iron-sulfur cluster assembly scaffold protein | SWIT_RS00010 | Not Available | Positive | 1870 - 2307 | 15143.1 |
| cation:proton antiporter | SWIT_RS00015 | Not Available | Positive | 2304 - 4091 | 62996.8 |
| duf423 domain-containing protein | SWIT_RS00020 | Not Available | Positive | 4078 - 4431 | 11800.8 |
| flotillin family protein | SWIT_RS00025 | Not Available | Negative | 4444 - 6153 | 61670.5 |
| yqij family protein | SWIT_RS00030 | Not Available | Negative | 6150 - 6767 | 21510.4 |
| 3-dehydroquinate synthase | SWIT_RS00035 | Not Available | Negative | 6840 - 7949 | 38731.4 |
| shikimate kinase | SWIT_RS00040 | Not Available | Negative | 7946 - 8488 | 19808.1 |
| hypothetical protein | SWIT_RS28830 | Not Available | Positive | 8622 - 8759 | 4892.17 |
| hypothetical protein | SWIT_RS00045 | Not Available | Positive | 8740 - 10554 | 63051.6 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
