Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SWIT_RS03645 | Not Available | Positive | 786827 - 789169 | 85861.6 |
| amidohydrolase | SWIT_RS03650 | Not Available | Positive | 789240 - 790934 | 60413.6 |
| helix-turn-helix domain-containing protein | SWIT_RS03655 | Not Available | Positive | 791044 - 791934 | 33766.9 |
| 5-amino-6-(d-ribitylamino)uracil--l-tyrosine 4-hydroxyphenyl transferase cofh | SWIT_RS03660 | Not Available | Positive | 792172 - 794448 | 81029.1 |
| nadph-dependent f420 reductase | SWIT_RS03665 | Not Available | Positive | 794445 - 795116 | 22219.9 |
| arac family transcriptional regulator | SWIT_RS03670 | Not Available | Negative | 795136 - 795921 | 28159.0 |
| mfs transporter | SWIT_RS03675 | Not Available | Positive | 796023 - 797234 | 42550.2 |
| pqq-dependent dehydrogenase, methanol/ethanol family | SWIT_RS03680 | Not Available | Negative | 797255 - 799324 | 74003.6 |
| arac family transcriptional regulator | SWIT_RS27210 | Not Available | Negative | 799413 - 800459 | 38425.9 |
| ester cyclase | SWIT_RS03690 | Not Available | Negative | 800615 - 801058 | 16364.3 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
