Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traf | SWIT_RS26080 | Not Available | Positive | 286722 - 287537 | 30311.1 |
| conjugal transfer protein trah | SWIT_RS26085 | Not Available | Positive | 287600 - 289000 | 49823.2 |
| conjugal transfer protein trag n-terminal domain-containing protein | SWIT_RS26090 | Not Available | Positive | 289017 - 291833 | 99857.6 |
| hypothetical protein | SWIT_RS26095 | Not Available | Negative | 291842 - 292042 | 7056.53 |
| hypothetical protein | SWIT_RS26100 | Not Available | Positive | 292116 - 292433 | 11356.0 |
| bax inhibitor-1/ycca family protein | SWIT_RS26105 | Not Available | Positive | 292631 - 293332 | 25051.2 |
| hded family acid-resistance protein | SWIT_RS26110 | Not Available | Positive | 293344 - 293967 | 21507.2 |
| acyl carrier protein | SWIT_RS26115 | Not Available | Negative | 294041 - 294277 | 8546.17 |
| hd-gyp domain-containing protein | SWIT_RS26120 | Not Available | Negative | 294496 - 295836 | 49132.6 |
| pas domain-containing sensor histidine kinase | SWIT_RS26125 | Not Available | Negative | 295901 - 298165 | 81753.6 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
