Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | SWIT_RS25520 | Not Available | Positive | 160508 - 163035 | 89721.4 |
| acvb/virj family lysyl-phosphatidylglycerol hydrolase | SWIT_RS25525 | Not Available | Positive | 163032 - 163766 | 25642.0 |
| hypothetical protein | SWIT_RS28505 | Not Available | Negative | 163787 - 164308 | 18381.9 |
| mucr family transcriptional regulator | SWIT_RS27735 | Not Available | Positive | 164608 - 165087 | 17192.9 |
| hwe histidine kinase domain-containing protein | SWIT_RS25530 | Not Available | Negative | 165126 - 166805 | 60641.4 |
| toprim domain-containing protein | SWIT_RS25535 | Not Available | Negative | 166945 - 167796 | 31142.7 |
| fused mfs/spermidine synthase | SWIT_RS25540 | Not Available | Negative | 167881 - 168780 | 32986.8 |
| yoak family protein | SWIT_RS25545 | Not Available | Negative | 168777 - 169442 | 23055.7 |
| hypothetical protein | SWIT_RS25550 | Not Available | Negative | 169456 - 169656 | 7451.95 |
| do family serine endopeptidase | SWIT_RS25555 | Not Available | Negative | 169911 - 171365 | 50627.4 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
