Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e/g | SWIT_RS19450 | Not Available | Positive | 4229367 - 4231997 | 96474.2 |
| m48 family metalloprotease | SWIT_RS19455 | Not Available | Positive | 4232080 - 4233462 | 49101.1 |
| dsba family protein | SWIT_RS19460 | Not Available | Positive | 4233459 - 4234220 | 27728.7 |
| duf4112 domain-containing protein | SWIT_RS19465 | Not Available | Negative | 4234230 - 4234673 | 16196.1 |
| abc transporter substrate-binding protein | SWIT_RS19470 | Not Available | Negative | 4234709 - 4236196 | 53208.1 |
| peptide abc transporter substrate-binding protein | SWIT_RS19475 | Not Available | Negative | 4236193 - 4237722 | 55719.6 |
| duf885 family protein | SWIT_RS19480 | Not Available | Positive | 4237938 - 4239680 | 65757.3 |
| ydiy family protein | SWIT_RS19485 | Not Available | Positive | 4239787 - 4240704 | 33370.2 |
| spinster family mfs transporter | SWIT_RS19490 | Not Available | Negative | 4240706 - 4241923 | 42885.5 |
| tonb-dependent receptor | SWIT_RS19495 | Not Available | Negative | 4241980 - 4244211 | 81157.3 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
