Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tim44/tima family putative adaptor protein | SWIT_RS19350 | Not Available | Positive | 4205951 - 4206601 | 23478.5 |
| murein transglycosylase a | SWIT_RS19355 | Not Available | Positive | 4206598 - 4207836 | 43381.7 |
| smr/muts family protein | SWIT_RS19360 | Not Available | Positive | 4207814 - 4208386 | 20764.0 |
| cation transporter | SWIT_RS19365 | Not Available | Negative | 4208383 - 4209024 | 21898.8 |
| hypothetical protein | SWIT_RS19370 | Not Available | Negative | 4209223 - 4210059 | 25533.8 |
| s8 family serine peptidase | SWIT_RS19375 | Not Available | Negative | 4210169 - 4211434 | 41973.7 |
| rna polymerase sigma factor | SWIT_RS19380 | Not Available | Positive | 4211566 - 4212057 | 18536.5 |
| anti-sigma factor family protein | SWIT_RS19385 | Not Available | Positive | 4212054 - 4212755 | 24182.6 |
| hypothetical protein | SWIT_RS19390 | Not Available | Positive | 4212862 - 4213074 | 7366.0 |
| malate synthase g | SWIT_RS19395 | Not Available | Positive | 4213182 - 4215284 | 74874.4 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
