Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase | SWIT_RS19155 | Not Available | Negative | 4160358 - 4162073 | 61700.6 |
| ompp1/fadl family transporter | SWIT_RS19160 | Not Available | Negative | 4162091 - 4163401 | 46017.5 |
| duf2147 domain-containing protein | SWIT_RS19165 | Not Available | Negative | 4163436 - 4163840 | 14478.6 |
| thiolase family protein | SWIT_RS19170 | Not Available | Positive | 4164007 - 4165143 | 38812.8 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | SWIT_RS19175 | Not Available | Positive | 4165146 - 4167452 | 81556.1 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | SWIT_RS19180 | Not Available | Positive | 4167594 - 4169384 | 64545.0 |
| dead/deah box helicase | SWIT_RS19185 | Not Available | Negative | 4169451 - 4171232 | 64758.6 |
| acyltransferase family protein | SWIT_RS19190 | Not Available | Positive | 4171565 - 4172716 | 41521.2 |
| nad(p)/fad-dependent oxidoreductase | SWIT_RS19195 | Not Available | Negative | 4172671 - 4173846 | 41388.8 |
| peptide chain release factor 3 | SWIT_RS19200 | Not Available | Positive | 4174066 - 4175649 | 58219.4 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
