Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3035 domain-containing protein | SWIT_RS19105 | Not Available | Negative | 4150794 - 4151225 | 14602.4 |
| signal peptidase ii | SWIT_RS19110 | Not Available | Negative | 4151215 - 4151733 | 18620.0 |
| isoleucine--trna ligase | SWIT_RS19115 | Not Available | Negative | 4151726 - 4154587 | 105381.0 |
| bifunctional riboflavin kinase/fad synthetase | SWIT_RS19120 | Not Available | Negative | 4154650 - 4155591 | 33822.4 |
| dihydrofolate reductase | SWIT_RS19125 | Not Available | Negative | 4155799 - 4156287 | 17823.3 |
| thymidylate synthase | SWIT_RS19130 | Not Available | Negative | 4156284 - 4157210 | 34967.8 |
| exodeoxyribonuclease iii | SWIT_RS19135 | Not Available | Positive | 4157426 - 4158217 | 30429.2 |
| gtp cyclohydrolase ii | SWIT_RS19140 | Not Available | Positive | 4158214 - 4159275 | 37225.8 |
| l,d-transpeptidase | SWIT_RS19145 | Not Available | Positive | 4159272 - 4159778 | 17810.2 |
| merr family transcriptional regulator | SWIT_RS19150 | Not Available | Negative | 4159943 - 4160353 | 15615.0 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
