Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate and iron-dependent oxygenase domain-containing protein | SWIT_RS19055 | Not Available | Positive | 4140542 - 4141492 | 34867.6 |
| s10 family peptidase | SWIT_RS19060 | Not Available | Positive | 4141603 - 4143117 | 54774.3 |
| preq(1) synthase | SWIT_RS19065 | Not Available | Negative | 4143161 - 4143613 | 16396.6 |
| 3-mercaptopyruvate sulfurtransferase | SWIT_RS19070 | Not Available | Positive | 4143804 - 4144643 | 30036.5 |
| cystathionine beta-lyase | SWIT_RS19075 | Not Available | Positive | 4144640 - 4145836 | 42297.6 |
| hypothetical protein | SWIT_RS19080 | Not Available | Negative | 4145887 - 4146267 | 12850.5 |
| torf family putative porin | SWIT_RS19085 | Not Available | Positive | 4146577 - 4147326 | 25856.1 |
| abc transporter atp-binding protein | SWIT_RS19090 | Not Available | Negative | 4147384 - 4148934 | 54311.2 |
| abc transporter permease | SWIT_RS19095 | Not Available | Negative | 4148931 - 4149713 | 27734.2 |
| abc transporter permease | SWIT_RS19100 | Not Available | Negative | 4149718 - 4150638 | 32378.7 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
