Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SWIT_RS18955 | Not Available | Negative | 4113743 - 4115011 | 45323.3 |
| aldehyde dehydrogenase family protein | SWIT_RS18960 | Not Available | Negative | 4115406 - 4116914 | 53451.9 |
| apc family permease | SWIT_RS18965 | Not Available | Negative | 4116942 - 4118399 | 50084.1 |
| nuclear transport factor 2 family protein | SWIT_RS18970 | Not Available | Positive | 4118603 - 4119016 | 15035.7 |
| hypothetical protein | SWIT_RS18975 | Not Available | Positive | 4119020 - 4119499 | 18033.8 |
| lysr family transcriptional regulator | SWIT_RS18980 | Not Available | Positive | 4119508 - 4120473 | 35494.3 |
| tonb-dependent receptor | SWIT_RS18985 | Not Available | Positive | 4120633 - 4122936 | 83200.4 |
| amidohydrolase | SWIT_RS18990 | Not Available | Positive | 4122961 - 4124550 | 57317.0 |
| cobw family gtp-binding protein | SWIT_RS18995 | Not Available | Positive | 4124540 - 4125520 | 34901.1 |
| nad(p)/fad-dependent oxidoreductase | SWIT_RS19000 | Not Available | Negative | 4125634 - 4126890 | 43940.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
