Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dps family protein | SWIT_RS18865 | Not Available | Negative | 4095309 - 4095788 | 17726.1 |
| tlpa disulfide reductase family protein | SWIT_RS18870 | Not Available | Negative | 4095809 - 4096597 | 27631.8 |
| cytochrome bd-i oxidase subunit cydx | SWIT_RS27585 | Not Available | Negative | 4096609 - 4096719 | 4012.67 |
| cytochrome d ubiquinol oxidase subunit ii | SWIT_RS18880 | Not Available | Negative | 4096734 - 4097882 | 41318.1 |
| cytochrome ubiquinol oxidase subunit i | SWIT_RS18885 | Not Available | Negative | 4097895 - 4099481 | 58370.7 |
| thiol reductant abc exporter subunit cydd | SWIT_RS18890 | Not Available | Positive | 4099572 - 4101152 | 54229.0 |
| amino acid abc transporter atp-binding/permease protein | SWIT_RS18895 | Not Available | Positive | 4101149 - 4102783 | 56266.8 |
| chloride channel protein | SWIT_RS18900 | Not Available | Negative | 4102768 - 4104516 | 60911.1 |
| hypothetical protein | SWIT_RS28315 | Not Available | Negative | 4104520 - 4104714 | 6541.56 |
| arsr/smtb family transcription factor | SWIT_RS18905 | Not Available | Negative | 4104792 - 4105166 | 13200.1 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
