Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SWIT_RS18725 | Not Available | Negative | 4064898 - 4065845 | 35216.4 |
| tetr/acrr family transcriptional regulator | SWIT_RS18730 | Not Available | Positive | 4066170 - 4066778 | 22006.7 |
| secretion protein hlyd | SWIT_RS18735 | Not Available | Positive | 4066775 - 4067806 | 36700.8 |
| atp-binding cassette domain-containing protein | SWIT_RS18740 | Not Available | Positive | 4067808 - 4069592 | 63454.3 |
| abc transporter permease | SWIT_RS18745 | Not Available | Positive | 4069589 - 4070758 | 42404.2 |
| abc transporter permease | SWIT_RS18750 | Not Available | Positive | 4070765 - 4071889 | 40435.8 |
| efflux transporter outer membrane subunit | SWIT_RS18755 | Not Available | Positive | 4071886 - 4073343 | 51489.0 |
| tolc family protein | SWIT_RS18760 | Not Available | Negative | 4073388 - 4074623 | 43978.8 |
| duf3240 family protein | SWIT_RS18765 | Not Available | Negative | 4074623 - 4074922 | 10942.2 |
| efflux rnd transporter permease subunit | SWIT_RS18770 | Not Available | Negative | 4074915 - 4077986 | 108895.0 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
