Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiator protein a | SWIT_RS18625 | Not Available | Positive | 4046742 - 4047635 | 33629.5 |
| duf2840 domain-containing protein | SWIT_RS18630 | Not Available | Positive | 4047907 - 4048428 | 19428.4 |
| s26 family signal peptidase | SWIT_RS18635 | Not Available | Positive | 4048425 - 4049003 | 20415.8 |
| duf736 domain-containing protein | SWIT_RS18640 | Not Available | Positive | 4048984 - 4049316 | 12349.3 |
| lytic transglycosylase domain-containing protein | SWIT_RS18645 | Not Available | Positive | 4049506 - 4050222 | 25228.1 |
| relaxase/mobilization nuclease domain-containing protein | SWIT_RS18650 | Not Available | Positive | 4050482 - 4052212 | 63929.3 |
| conjugal transfer protein trag | SWIT_RS18655 | Not Available | Positive | 4052392 - 4054422 | 74709.7 |
| copg family ribbon-helix-helix protein | SWIT_RS18660 | Not Available | Positive | 4054419 - 4054838 | 15673.7 |
| p-type conjugative transfer atpase trbb | SWIT_RS18665 | Not Available | Positive | 4054979 - 4055965 | 34495.9 |
| trbc/virb2 family protein | SWIT_RS18670 | Not Available | Positive | 4055962 - 4056297 | 11428.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
