Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | SWIT_RS18425 | Not Available | Positive | 4002637 - 4003152 | 18477.8 |
| amidohydrolase family protein | SWIT_RS18430 | Not Available | Positive | 4003255 - 4004418 | 43756.0 |
| mfs transporter | SWIT_RS18435 | Not Available | Positive | 4004538 - 4005770 | 42880.6 |
| cysteine hydrolase family protein | SWIT_RS18440 | Not Available | Positive | 4005767 - 4006402 | 22141.9 |
| hydantoinase b/oxoprolinase family protein | SWIT_RS18445 | Not Available | Positive | 4006395 - 4008089 | 60140.3 |
| hydantoinase/oxoprolinase family protein | SWIT_RS18450 | Not Available | Positive | 4008086 - 4010251 | 75076.9 |
| caib/baif coa transferase family protein | SWIT_RS18455 | Not Available | Negative | 4010437 - 4011636 | 43270.4 |
| thiolase c-terminal domain-containing protein | SWIT_RS18460 | Not Available | Positive | 4011831 - 4012994 | 40902.7 |
| zn-ribbon domain-containing ob-fold protein | SWIT_RS18465 | Not Available | Positive | 4012991 - 4013401 | 14876.7 |
| tonb-dependent receptor | SWIT_RS18470 | Not Available | Positive | 4013486 - 4015801 | 83615.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
