Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2794 domain-containing protein | SWIT_RS18125 | Not Available | Negative | 3947816 - 3948148 | 12413.4 |
| serine o-acetyltransferase epsc | SWIT_RS18130 | Not Available | Negative | 3948148 - 3948849 | 25447.7 |
| carboxymuconolactone decarboxylase family protein | SWIT_RS18135 | Not Available | Negative | 3948998 - 3949519 | 18306.1 |
| peroxiredoxin | SWIT_RS18140 | Not Available | Negative | 3949662 - 3950207 | 19840.4 |
| hydrogen peroxide-inducible genes activator | SWIT_RS18145 | Not Available | Positive | 3950317 - 3951216 | 32894.2 |
| metallophosphoesterase family protein | SWIT_RS18150 | Not Available | Negative | 3951275 - 3952018 | 26524.5 |
| anti-sigma factor domain-containing protein | SWIT_RS18155 | Not Available | Negative | 3952031 - 3952732 | 24627.7 |
| sigma-70 family rna polymerase sigma factor | SWIT_RS18160 | Not Available | Negative | 3952725 - 3953255 | 19728.4 |
| molybdenum cofactor biosynthesis protein moae | SWIT_RS18165 | Not Available | Negative | 3953290 - 3953751 | 16271.5 |
| molybdopterin converting factor subunit 1 | SWIT_RS18170 | Not Available | Negative | 3953748 - 3954005 | 8756.47 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
