Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | SWIT_RS17925 | Not Available | Positive | 3904388 - 3905131 | 26395.3 |
| atp-binding protein | SWIT_RS17930 | Not Available | Negative | 3905145 - 3906779 | 58438.7 |
| tigr02186 family protein | SWIT_RS17935 | Not Available | Negative | 3906853 - 3907614 | 27497.3 |
| sulfite exporter taue/safe family protein | SWIT_RS17940 | Not Available | Negative | 3907611 - 3908525 | 31727.4 |
| ligase-associated dna damage response endonuclease pdem | SWIT_RS17945 | Not Available | Positive | 3908658 - 3909320 | 23770.8 |
| ggdef domain-containing protein | SWIT_RS17950 | Not Available | Positive | 3909394 - 3910611 | 44375.3 |
| peptide-methionine (s)-s-oxide reductase msra | SWIT_RS17955 | Not Available | Negative | 3910596 - 3911333 | 26179.3 |
| pyridoxal phosphate-dependent aminotransferase | SWIT_RS17960 | Not Available | Negative | 3911541 - 3912743 | 42809.1 |
| aminotransferase class iv | SWIT_RS17965 | Not Available | Negative | 3912860 - 3913483 | 22505.0 |
| mbl fold metallo-hydrolase | SWIT_RS17970 | Not Available | Positive | 3913698 - 3914366 | 23567.1 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
