Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii and iii secretion system protein family protein | SWIT_RS17775 | Not Available | Negative | 3870037 - 3871332 | 44724.6 |
| flp pilus assembly protein cpab | SWIT_RS17780 | Not Available | Negative | 3871329 - 3872210 | 29933.3 |
| hypothetical protein | SWIT_RS27335 | Not Available | Positive | 3872748 - 3873857 | 38385.3 |
| lrp/asnc ligand binding domain-containing protein | SWIT_RS17790 | Not Available | Positive | 3873948 - 3874229 | 10707.9 |
| lysr family transcriptional regulator | SWIT_RS17795 | Not Available | Negative | 3874202 - 3875167 | 34739.0 |
| 2-hydroxymuconic semialdehyde dehydrogenase | SWIT_RS17800 | Not Available | Positive | 3875250 - 3876740 | 53572.0 |
| 2-keto-4-pentenoate hydratase | SWIT_RS17805 | Not Available | Positive | 3876737 - 3877528 | 27071.7 |
| 2-keto-4-pentenoate hydratase | SWIT_RS17810 | Not Available | Positive | 3877525 - 3878298 | 27180.9 |
| rida family protein | SWIT_RS17815 | Not Available | Positive | 3878295 - 3878726 | 15400.3 |
| 3-hydroxyanthranilate 3,4-dioxygenase | SWIT_RS17820 | Not Available | Positive | 3878723 - 3879274 | 20464.5 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
