Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-ribbon domain-containing ob-fold protein | SWIT_RS01715 | Not Available | Negative | 365290 - 365649 | 13033.7 |
| enoyl-coa hydratase/isomerase family protein | SWIT_RS01720 | Not Available | Negative | 365654 - 366424 | 27867.8 |
| acetyl-coa c-acyltransferase | SWIT_RS01725 | Not Available | Positive | 366611 - 367789 | 41056.3 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | SWIT_RS01730 | Not Available | Positive | 367912 - 368892 | 35593.2 |
| alpha-ketoacid dehydrogenase subunit beta | SWIT_RS01735 | Not Available | Positive | 368892 - 369896 | 35006.4 |
| biotin/lipoyl-containing protein | SWIT_RS01740 | Not Available | Positive | 369922 - 370152 | 7921.47 |
| duf4286 family protein | SWIT_RS01745 | Not Available | Positive | 370149 - 370451 | 11158.3 |
| nadp-dependent oxidoreductase | SWIT_RS01750 | Not Available | Positive | 370454 - 371356 | 30468.8 |
| amp-binding protein | SWIT_RS01755 | Not Available | Negative | 371400 - 372923 | 54025.6 |
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS01760 | Not Available | Negative | 372916 - 373818 | 31312.3 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
