Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | SWIT_RS17515 | Not Available | Negative | 3809556 - 3813923 | 160903.0 |
| ggdef domain-containing protein | SWIT_RS17520 | Not Available | Negative | 3814377 - 3815408 | 36158.3 |
| l,d-transpeptidase | SWIT_RS17525 | Not Available | Positive | 3815615 - 3816607 | 34078.5 |
| hypothetical protein | SWIT_RS17530 | Not Available | Positive | 3816691 - 3817311 | 23048.1 |
| xre family transcriptional regulator | SWIT_RS17535 | Not Available | Positive | 3817364 - 3818386 | 37583.3 |
| frg domain-containing protein | SWIT_RS27330 | Not Available | Positive | 3818981 - 3819670 | 25861.9 |
| slc13 family permease | SWIT_RS17545 | Not Available | Negative | 3819738 - 3821522 | 62317.3 |
| 50s ribosomal protein l7/l12 | SWIT_RS17550 | Not Available | Negative | 3821736 - 3822116 | 12864.5 |
| 50s ribosomal protein l10 | SWIT_RS17555 | Not Available | Negative | 3822173 - 3822688 | 17803.7 |
| cytochrome b | SWIT_RS17560 | Not Available | Negative | 3823000 - 3823542 | 19903.8 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
