Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xrta/pep-cterm system histidine kinase prsk | SWIT_RS17370 | Not Available | Positive | 3774286 - 3776436 | 77364.4 |
| pep-cterm-box response regulator transcription factor | SWIT_RS17375 | Not Available | Positive | 3776433 - 3777788 | 49074.0 |
| atp-binding protein | SWIT_RS17380 | Not Available | Positive | 3777896 - 3778732 | 29791.6 |
| atp-binding protein | SWIT_RS17385 | Not Available | Negative | 3778880 - 3780214 | 48848.6 |
| response regulator transcription factor | SWIT_RS17390 | Not Available | Negative | 3780478 - 3781140 | 24308.8 |
| pepsy domain-containing protein | SWIT_RS17395 | Not Available | Negative | 3781173 - 3781397 | 8369.97 |
| abc-f family atp-binding cassette domain-containing protein | SWIT_RS17400 | Not Available | Positive | 3781571 - 3783361 | 65564.7 |
| chorismate mutase | SWIT_RS17405 | Not Available | Negative | 3783613 - 3783897 | 10584.6 |
| polyprenyl synthetase family protein | SWIT_RS17410 | Not Available | Positive | 3784019 - 3785044 | 36739.1 |
| atp-dependent helicase hrpb | SWIT_RS17415 | Not Available | Positive | 3785218 - 3787662 | 86647.7 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
