Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2171 domain-containing protein | SWIT_RS17320 | Not Available | Positive | 3763207 - 3764073 | 32951.9 |
| patatin-like phospholipase family protein | SWIT_RS17325 | Not Available | Positive | 3764188 - 3765339 | 42060.1 |
| 3-hydroxybutyrate dehydrogenase | SWIT_RS17330 | Not Available | Positive | 3765360 - 3766145 | 27384.1 |
| duf4893 domain-containing protein | SWIT_RS17335 | Not Available | Positive | 3766226 - 3766858 | 23192.1 |
| m20 family metallopeptidase | SWIT_RS17340 | Not Available | Positive | 3766861 - 3768147 | 45100.4 |
| response regulator | SWIT_RS17345 | Not Available | Negative | 3768270 - 3768635 | 12867.3 |
| short-chain fatty acyl-coa regulator family protein | SWIT_RS17350 | Not Available | Positive | 3769135 - 3770526 | 50628.9 |
| aldo/keto reductase | SWIT_RS17355 | Not Available | Negative | 3770639 - 3771595 | 33015.3 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | SWIT_RS17360 | Not Available | Negative | 3771710 - 3772795 | 38348.0 |
| tigr03013 family xrta/pep-cterm system glycosyltransferase | SWIT_RS17365 | Not Available | Positive | 3772892 - 3774280 | 51489.7 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
