Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SWIT_RS28280 | Not Available | Negative | 3754890 - 3755075 | 6369.81 |
| tonb-dependent receptor | SWIT_RS17275 | Not Available | Negative | 3755303 - 3756340 | 35941.6 |
| lysr family transcriptional regulator | SWIT_RS17280 | Not Available | Negative | 3756433 - 3757392 | 36119.8 |
| hypothetical protein | SWIT_RS17285 | Not Available | Negative | 3757471 - 3757812 | 11882.6 |
| duf4142 domain-containing protein | SWIT_RS17290 | Not Available | Negative | 3757809 - 3758333 | 17972.2 |
| rna polymerase sigma factor | SWIT_RS17295 | Not Available | Positive | 3758545 - 3759234 | 25251.5 |
| mechanosensitive ion channel family protein | SWIT_RS17300 | Not Available | Negative | 3759238 - 3760524 | 45736.6 |
| slc13 family permease | SWIT_RS17305 | Not Available | Negative | 3760569 - 3761879 | 45370.0 |
| hypothetical protein | SWIT_RS17310 | Not Available | Positive | 3761982 - 3762830 | 30551.6 |
| Trna-ala | Not Available | Not Available | Positive | 3762893 - 3762968 | Not Available |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
