Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | SWIT_RS16980 | Not Available | Negative | 3691032 - 3692033 | 34730.6 |
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS16985 | Not Available | Positive | 3692207 - 3693034 | 28405.1 |
| nad-dependent epimerase/dehydratase family protein | SWIT_RS16990 | Not Available | Positive | 3693051 - 3693950 | 31748.6 |
| tetr/acrr family transcriptional regulator | SWIT_RS16995 | Not Available | Positive | 3694004 - 3694669 | 23824.5 |
| cytochrome p450 | SWIT_RS17000 | Not Available | Positive | 3694730 - 3695908 | 43382.4 |
| nuclear transport factor 2 family protein | SWIT_RS17005 | Not Available | Negative | 3695922 - 3696446 | 19215.7 |
| n-acyl-d-amino-acid deacylase family protein | SWIT_RS17010 | Not Available | Positive | 3696567 - 3698315 | 64122.1 |
| helix-turn-helix domain-containing protein | SWIT_RS17015 | Not Available | Positive | 3698677 - 3699111 | 16074.4 |
| trna (guanine(46)-n(7))-methyltransferase trmb | SWIT_RS17020 | Not Available | Negative | 3699247 - 3699939 | 26289.7 |
| class i sam-dependent methyltransferase | SWIT_RS17025 | Not Available | Negative | 3699950 - 3700519 | 20501.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
