Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-methyltransferase | SWIT_RS16930 | Not Available | Positive | 3681325 - 3682269 | 33702.0 |
| llm class flavin-dependent oxidoreductase | SWIT_RS16935 | Not Available | Positive | 3682357 - 3683508 | 42218.3 |
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS16940 | Not Available | Positive | 3683505 - 3684272 | 25755.8 |
| helix-turn-helix transcriptional regulator | SWIT_RS16945 | Not Available | Negative | 3684452 - 3685573 | 40052.1 |
| alpha/beta hydrolase | SWIT_RS16950 | Not Available | Positive | 3685615 - 3686502 | 30031.0 |
| fad-dependent oxidoreductase | SWIT_RS16955 | Not Available | Negative | 3686544 - 3688238 | 60598.5 |
| nuclear transport factor 2 family protein | SWIT_RS16960 | Not Available | Positive | 3688366 - 3688986 | 24029.3 |
| alkene reductase | SWIT_RS16965 | Not Available | Positive | 3688986 - 3690056 | 37517.6 |
| dabb family protein | SWIT_RS16970 | Not Available | Negative | 3690057 - 3690704 | 23177.5 |
| hypothetical protein | SWIT_RS16975 | Not Available | Negative | 3690697 - 3691035 | 12521.0 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
