Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amine dehydrogenase large subunit | SWIT_RS16430 | Not Available | Negative | 3582523 - 3583680 | 41891.4 |
| c-type cytochrome | SWIT_RS16435 | Not Available | Negative | 3583703 - 3584083 | 12906.1 |
| tonb-dependent receptor | SWIT_RS16440 | Not Available | Negative | 3584104 - 3586296 | 80442.4 |
| tetr/acrr family transcriptional regulator | SWIT_RS16445 | Not Available | Positive | 3586507 - 3587130 | 23049.4 |
| lrp/asnc family transcriptional regulator | SWIT_RS16450 | Not Available | Negative | 3587266 - 3587739 | 17499.0 |
| duf6356 family protein | SWIT_RS16455 | Not Available | Positive | 3587849 - 3588058 | 7587.3 |
| redoxin domain-containing protein | SWIT_RS16460 | Not Available | Negative | 3588078 - 3588743 | 24028.7 |
| taud/tfda dioxygenase family protein | SWIT_RS16465 | Not Available | Positive | 3588979 - 3589839 | 31934.8 |
| sigma-54-dependent fis family transcriptional regulator | SWIT_RS16470 | Not Available | Negative | 3589862 - 3591607 | 64335.9 |
| tonb-dependent receptor | SWIT_RS16475 | Not Available | Positive | 3591793 - 3594375 | 93468.9 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
